Neotropical Bats from Costa Rica harbour Diverse Coronaviruses
Identifieur interne : 001966 ( Main/Exploration ); précédent : 001965; suivant : 001967Neotropical Bats from Costa Rica harbour Diverse Coronaviruses
Auteurs : A. Moreira-Soto [Costa Rica] ; L. Taylor-Castillo [Costa Rica] ; N. Vargas-Vargas [Costa Rica] ; B. Rodríguez-Herrera [Costa Rica] ; C. Jiménez [Costa Rica] ; E. Corrales-Aguilar [Costa Rica]Source :
- Zoonoses and Public Health [ 1863-1959 ] ; 2015-11.
Abstract
Bats are hosts of diverse coronaviruses (CoVs) known to potentially cross the host–species barrier. For analysing coronavirus diversity in a bat species‐rich country, a total of 421 anal swabs/faecal samples from Costa Rican bats were screened for CoV RNA‐dependent RNA polymerase (RdRp) gene sequences by a pancoronavirus PCR. Six families, 24 genera and 41 species of bats were analysed. The detection rate for CoV was 1%. Individuals (n = 4) from four different species of frugivorous (Artibeus jamaicensis, Carollia perspicillata and Carollia castanea) and nectivorous (Glossophaga soricina) bats were positive for coronavirus‐derived nucleic acids. Analysis of 440 nt. RdRp sequences allocated all Costa Rican bat CoVs to the α‐CoV group. Several CoVs sequences clustered near previously described CoVs from the same species of bat, but were phylogenetically distant from the human CoV sequences identified to date, suggesting no recent spillover events. The Glossophaga soricina CoV sequence is sufficiently dissimilar (26% homology to the closest known bat CoVs) to represent a unique coronavirus not clustering near other CoVs found in the same bat species so far, implying an even higher CoV diversity than previously suspected.
Url:
DOI: 10.1111/zph.12181
Affiliations:
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Vargas-Vargas</name><affiliation wicri:level="1"><country xml:lang="fr">Costa Rica</country><wicri:regionArea>CIET (Research Center for Tropical Diseases), Virology, Faculty of Microbiology, University of Costa Rica, San José</wicri:regionArea><wicri:noRegion>San José</wicri:noRegion></affiliation></author><author><name sortKey="Rodriguez Errera, B" sort="Rodriguez Errera, B" uniqKey="Rodriguez Errera B" first="B." last="Rodríguez-Herrera">B. Rodríguez-Herrera</name><affiliation wicri:level="1"><country xml:lang="fr">Costa Rica</country><wicri:regionArea>School of Biology, University of Costa Rica, San José</wicri:regionArea><wicri:noRegion>San José</wicri:noRegion></affiliation></author><author><name sortKey="Jimenez, C" sort="Jimenez, C" uniqKey="Jimenez C" first="C." last="Jiménez">C. 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Corrales-Aguilar</name><affiliation wicri:level="1"><country xml:lang="fr">Costa Rica</country><wicri:regionArea>CIET (Research Center for Tropical Diseases), Virology, Faculty of Microbiology, University of Costa Rica, San José</wicri:regionArea><wicri:noRegion>San José</wicri:noRegion></affiliation></author></analytic><monogr></monogr><series><title level="j" type="main">Zoonoses and Public Health</title><title level="j" type="alt">ZOONOSES AND PUBLIC HEALTH</title><idno type="ISSN">1863-1959</idno><idno type="eISSN">1863-2378</idno><imprint><biblScope unit="vol">62</biblScope><biblScope unit="issue">7</biblScope><biblScope unit="page" from="501">501</biblScope><biblScope unit="page" to="505">505</biblScope><biblScope unit="page-count">5</biblScope><date type="published" when="2015-11">2015-11</date></imprint><idno type="ISSN">1863-1959</idno></series></biblStruct></sourceDesc><seriesStmt><idno type="ISSN">1863-1959</idno></seriesStmt></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract">Bats are hosts of diverse coronaviruses (CoVs) known to potentially cross the host–species barrier. For analysing coronavirus diversity in a bat species‐rich country, a total of 421 anal swabs/faecal samples from Costa Rican bats were screened for CoV RNA‐dependent RNA polymerase (RdRp) gene sequences by a pancoronavirus PCR. Six families, 24 genera and 41 species of bats were analysed. The detection rate for CoV was 1%. Individuals (n = 4) from four different species of frugivorous (Artibeus jamaicensis, Carollia perspicillata and Carollia castanea) and nectivorous (Glossophaga soricina) bats were positive for coronavirus‐derived nucleic acids. Analysis of 440 nt. RdRp sequences allocated all Costa Rican bat CoVs to the α‐CoV group. Several CoVs sequences clustered near previously described CoVs from the same species of bat, but were phylogenetically distant from the human CoV sequences identified to date, suggesting no recent spillover events. The Glossophaga soricina CoV sequence is sufficiently dissimilar (26% homology to the closest known bat CoVs) to represent a unique coronavirus not clustering near other CoVs found in the same bat species so far, implying an even higher CoV diversity than previously suspected.</div></front></TEI><affiliations><list><country><li>Costa Rica</li></country></list><tree><country name="Costa Rica"><noRegion><name sortKey="Moreira Oto, A" sort="Moreira Oto, A" uniqKey="Moreira Oto A" first="A." last="Moreira-Soto">A. Moreira-Soto</name></noRegion><name sortKey="Corrales Guilar, E" sort="Corrales Guilar, E" uniqKey="Corrales Guilar E" first="E." last="Corrales-Aguilar">E. Corrales-Aguilar</name><name sortKey="Jimenez, C" sort="Jimenez, C" uniqKey="Jimenez C" first="C." last="Jiménez">C. Jiménez</name><name sortKey="Moreira Oto, A" sort="Moreira Oto, A" uniqKey="Moreira Oto A" first="A." last="Moreira-Soto">A. Moreira-Soto</name><name sortKey="Rodriguez Errera, B" sort="Rodriguez Errera, B" uniqKey="Rodriguez Errera B" first="B." last="Rodríguez-Herrera">B. Rodríguez-Herrera</name><name sortKey="Taylor Astillo, L" sort="Taylor Astillo, L" uniqKey="Taylor Astillo L" first="L." last="Taylor-Castillo">L. Taylor-Castillo</name><name sortKey="Vargas Argas, N" sort="Vargas Argas, N" uniqKey="Vargas Argas N" first="N." last="Vargas-Vargas">N. Vargas-Vargas</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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